Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type b 50s ribosomal protein l31 | EZ449_12435 | Not Available | Negative | 2903758 - 2904006 | 9711.64 |
| hypothetical protein | EZ449_12440 | Not Available | Negative | 2904254 - 2904958 | 25884.2 |
| response regulator transcription factor | EZ449_12445 | Not Available | Negative | 2905126 - 2905773 | 24248.5 |
| hypothetical protein | EZ449_12450 | Not Available | Negative | 2905829 - 2907580 | 66924.8 |
| hypothetical protein | EZ449_12455 | Not Available | Negative | 2907637 - 2907915 | 10808.0 |
| methylmalonyl-coa epimerase | EZ449_12460 | Not Available | Negative | 2908182 - 2908589 | 15127.2 |
| iscs subfamily cysteine desulfurase | EZ449_12465 | Not Available | Positive | 2908707 - 2909918 | 44133.1 |
| fe-s cluster assembly scaffold iscu | EZ449_12470 | Not Available | Positive | 2910015 - 2910428 | 14788.7 |
| iron-sulfur cluster assembly accessory protein | EZ449_12475 | Not Available | Positive | 2910516 - 2910842 | 11846.9 |
| long-chain fatty acid--coa ligase | EZ449_12480 | Not Available | Positive | 2911146 - 2913062 | 71721.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

