Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | EZ449_12385 | Not Available | Positive | 2892874 - 2893659 | 29519.3 |
| diguanylate cyclase | EZ449_12390 | Not Available | Positive | 2893649 - 2896654 | 114914.0 |
| smc-scp complex subunit scpb | EZ449_12395 | Not Available | Positive | 2896906 - 2897472 | 21611.9 |
| hypothetical protein | EZ449_12400 | Not Available | Positive | 2897561 - 2897755 | 7458.97 |
| gnat family n-acetyltransferase | EZ449_12405 | Not Available | Positive | 2897831 - 2898958 | 43623.3 |
| xre family transcriptional regulator | EZ449_12410 | Not Available | Negative | 2899053 - 2899373 | 11689.5 |
| peptidoglycan synthetase | EZ449_12415 | Not Available | Negative | 2899413 - 2900765 | 50399.4 |
| 50s ribosomal protein l11 methyltransferase | EZ449_12420 | Not Available | Negative | 2900852 - 2901691 | 31658.3 |
| triose-phosphate isomerase | EZ449_12425 | Not Available | Negative | 2901691 - 2902452 | 27642.9 |
| glucose-1-phosphate thymidylyltransferase | EZ449_12430 | Not Available | Negative | 2902519 - 2903685 | 43164.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

