Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | EZ449_12335 | Not Available | Positive | 2881556 - 2882110 | 20916.8 |
| hypothetical protein | EZ449_12340 | Not Available | Positive | 2882189 - 2882548 | 13673.7 |
| ferritin | EZ449_12345 | Not Available | Positive | 2882822 - 2883349 | 20537.3 |
| circularly permuted type 2 atp-grasp protein | EZ449_12350 | Not Available | Positive | 2883803 - 2885251 | 54524.7 |
| alpha-e domain-containing protein | EZ449_12355 | Not Available | Positive | 2885261 - 2886196 | 36528.6 |
| transglutaminase family protein | EZ449_12360 | Not Available | Positive | 2886244 - 2887236 | 37861.6 |
| m20/m25/m40 family metallo-hydrolase | EZ449_12365 | Not Available | Positive | 2887369 - 2889009 | 60316.3 |
| asparagine--trna ligase | EZ449_12370 | Not Available | Positive | 2889178 - 2890626 | 55456.1 |
| ferritin-like domain-containing protein | EZ449_12375 | Not Available | Negative | 2891152 - 2892003 | 30071.2 |
| ferritin-like domain-containing protein | EZ449_12380 | Not Available | Negative | 2892022 - 2892747 | 25598.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

