Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_12285 | Not Available | Negative | 2868223 - 2868765 | 20287.1 |
| hypothetical protein | EZ449_12290 | Not Available | Negative | 2868767 - 2869960 | 44806.0 |
| type ii and iii secretion system protein | EZ449_12295 | Not Available | Negative | 2869961 - 2871910 | 71159.7 |
| type ii/iv secretion system protein | EZ449_12300 | Not Available | Negative | 2871910 - 2872498 | 21662.5 |
| atp-binding protein | EZ449_12305 | Not Available | Positive | 2872499 - 2872680 | 6644.87 |
| phosphoribosylformylglycinamidine cyclo-ligase | EZ449_12310 | Not Available | Positive | 2872987 - 2874168 | 43222.6 |
| hypothetical protein | EZ449_12315 | Not Available | Negative | 2874601 - 2875188 | 20288.4 |
| tonb-dependent receptor | EZ449_12320 | Not Available | Negative | 2875215 - 2878571 | 121647.0 |
| dihydrolipoyl dehydrogenase | EZ449_12325 | Not Available | Positive | 2879193 - 2880581 | 48614.0 |
| mbl fold metallo-hydrolase | EZ449_12330 | Not Available | Positive | 2880717 - 2881556 | 31815.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

