Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_12185 | Not Available | Negative | 2849033 - 2849404 | 13687.4 |
| trag family conjugative transposon atpase | EZ449_12190 | Not Available | Negative | 2849517 - 2851967 | 92596.7 |
| duf4133 domain-containing protein | EZ449_12195 | Not Available | Negative | 2851969 - 2852304 | 11944.1 |
| duf4134 domain-containing protein | EZ449_12200 | Not Available | Negative | 2852322 - 2852636 | 11024.6 |
| hypothetical protein | EZ449_12205 | Not Available | Positive | 2852669 - 2852797 | 5120.33 |
| hypothetical protein | EZ449_12210 | Not Available | Positive | 2853991 - 2854515 | 20934.8 |
| tatd family deoxyribonuclease | EZ449_12215 | Not Available | Negative | 2854537 - 2855262 | 27928.9 |
| hypothetical protein | EZ449_12220 | Not Available | Negative | 2855255 - 2856574 | 48174.9 |
| hypothetical protein | EZ449_12225 | Not Available | Negative | 2856564 - 2857397 | 30483.6 |
| ntpase | EZ449_12230 | Not Available | Negative | 2857399 - 2859270 | 70565.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

