Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_12085 | Not Available | Negative | 2833948 - 2834520 | 21652.8 |
| eve domain-containing protein | EZ449_12090 | Not Available | Negative | 2834597 - 2835010 | 15844.8 |
| site-specific integrase | EZ449_12095 | Not Available | Positive | 2835124 - 2836356 | 48132.0 |
| hypothetical protein | EZ449_12100 | Not Available | Negative | 2836461 - 2837204 | 28458.3 |
| hypothetical protein | EZ449_12105 | Not Available | Negative | 2837345 - 2837572 | 8771.87 |
| duf945 domain-containing protein | EZ449_12110 | Not Available | Negative | 2837618 - 2838682 | 38912.9 |
| single-stranded dna-binding protein | EZ449_12115 | Not Available | Negative | 2838718 - 2839077 | 13133.5 |
| hypothetical protein | EZ449_12120 | Not Available | Negative | 2839316 - 2839891 | 21154.5 |
| hypothetical protein | EZ449_12125 | Not Available | Positive | 2840007 - 2840474 | 17917.4 |
| llm class flavin-dependent oxidoreductase | EZ449_12130 | Not Available | Negative | 2840624 - 2841646 | 37430.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

