Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_01095 | Not Available | Positive | 269282 - 269998 | 27476.4 |
| hypothetical protein | EZ449_01100 | Not Available | Positive | 270005 - 270715 | 27082.7 |
| ribonuclease iii | EZ449_01105 | Not Available | Negative | 270779 - 271507 | 27551.7 |
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | EZ449_01110 | Not Available | Negative | 271602 - 272855 | 44418.8 |
| acyl carrier protein | EZ449_01115 | Not Available | Negative | 272877 - 273113 | 8460.92 |
| ipexxxvdy family protein | EZ449_01120 | Not Available | Positive | 273272 - 273691 | 16270.7 |
| pyruvate kinase | EZ449_01125 | Not Available | Positive | 273841 - 275271 | 52222.5 |
| Trna-ser | Not Available | Not Available | Positive | 275357 - 275441 | Not Available |
| s9 family peptidase | EZ449_01135 | Not Available | Positive | 276384 - 278513 | 79450.5 |
| epimerase | EZ449_01140 | Not Available | Positive | 279111 - 279788 | 25414.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

