Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdp-mannose pyrophosphatase nudk | EZ449_12035 | Not Available | Negative | 2821231 - 2821815 | 22100.4 |
| abc transporter atp-binding protein | EZ449_12040 | Not Available | Positive | 2822118 - 2824025 | 71755.7 |
| duf5103 domain-containing protein | EZ449_12045 | Not Available | Positive | 2824332 - 2825606 | 49304.8 |
| formylglycine-generating enzyme family protein | EZ449_12050 | Not Available | Positive | 2825752 - 2826708 | 36716.2 |
| twin-arginine translocation signal domain-containing protein | EZ449_12055 | Not Available | Positive | 2826740 - 2828059 | 48698.6 |
| fad:protein fmn transferase | EZ449_12060 | Not Available | Positive | 2828068 - 2829063 | 36720.5 |
| xylose isomerase | EZ449_12065 | Not Available | Positive | 2829094 - 2830020 | 34651.5 |
| alpha-amylase | EZ449_12070 | Not Available | Negative | 2830185 - 2831675 | 57099.6 |
| acyl-coa thioesterase | EZ449_12075 | Not Available | Positive | 2832180 - 2832701 | 19380.4 |
| sodium:proton antiporter | EZ449_12080 | Not Available | Positive | 2832771 - 2833958 | 43811.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

