Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2'-5' rna ligase family protein | EZ449_11985 | Not Available | Positive | 2813319 - 2813894 | 22633.5 |
| hypothetical protein | EZ449_11990 | Not Available | Negative | 2813895 - 2816318 | 92275.6 |
| rna methyltransferase | EZ449_11995 | Not Available | Positive | 2816309 - 2817058 | 27720.7 |
| Trna-cys | Not Available | Not Available | Positive | 2817125 - 2817198 | Not Available |
| spore protein | EZ449_12005 | Not Available | Positive | 2817233 - 2817403 | 6315.68 |
| dna alkylation repair protein | EZ449_12010 | Not Available | Positive | 2817512 - 2818177 | 25174.4 |
| voc family protein | EZ449_12015 | Not Available | Positive | 2818372 - 2818692 | 12511.6 |
| quinone-dependent dihydroorotate dehydrogenase | EZ449_12020 | Not Available | Negative | 2818699 - 2819730 | 38172.4 |
| nad-dependent epimerase/dehydratase family protein | EZ449_12025 | Not Available | Negative | 2819856 - 2820506 | 23371.7 |
| rrf2 family transcriptional regulator | EZ449_12030 | Not Available | Negative | 2820600 - 2821010 | 14936.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

