Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | EZ449_11935 | Not Available | Negative | 2801411 - 2802544 | 43069.5 |
| hypothetical protein | EZ449_11940 | Not Available | Negative | 2802760 - 2804835 | 77464.9 |
| alpha/beta hydrolase | EZ449_11945 | Not Available | Positive | 2805007 - 2805843 | 31299.4 |
| response regulator | EZ449_11950 | Not Available | Negative | 2805840 - 2806607 | 28485.8 |
| response regulator transcription factor | EZ449_11955 | Not Available | Negative | 2806621 - 2807316 | 25980.8 |
| insulinase family protein | EZ449_11960 | Not Available | Positive | 2807555 - 2808178 | 22769.9 |
| m20/m25/m40 family metallo-hydrolase | EZ449_11965 | Not Available | Positive | 2808318 - 2809667 | 50046.6 |
| tryptophan-rich sensory protein | EZ449_11970 | Not Available | Positive | 2809711 - 2810184 | 18045.6 |
| patatin | EZ449_11975 | Not Available | Positive | 2810240 - 2812531 | 86654.3 |
| hypothetical protein | EZ449_11980 | Not Available | Positive | 2812528 - 2813058 | 19677.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

