Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_11785 | Not Available | Negative | 2773861 - 2774547 | 25698.2 |
| septum formation protein maf | EZ449_11790 | Not Available | Negative | 2774619 - 2775191 | 21381.8 |
| hypothetical protein | EZ449_11795 | Not Available | Negative | 2775265 - 2775669 | 15355.7 |
| had-iiia family hydrolase | EZ449_11800 | Not Available | Negative | 2775787 - 2776314 | 19202.2 |
| fe-s assembly protein iscx | EZ449_11805 | Not Available | Negative | 2776384 - 2776629 | 9985.44 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | EZ449_11810 | Not Available | Negative | 2776696 - 2777028 | 12014.3 |
| duf2520 domain-containing protein | EZ449_11815 | Not Available | Negative | 2777070 - 2777834 | 27797.5 |
| cytochrome c biogenesis protein | EZ449_11820 | Not Available | Negative | 2777837 - 2780302 | 92756.1 |
| cytochrome c maturation protein ccme | EZ449_11825 | Not Available | Negative | 2780307 - 2780741 | 16402.5 |
| hypothetical protein | EZ449_11830 | Not Available | Positive | 2781084 - 2781764 | 25177.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

