Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol-phosphate transaminase | EZ449_11685 | Not Available | Positive | 2750137 - 2751177 | 38873.5 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | EZ449_11690 | Not Available | Positive | 2751181 - 2752314 | 42457.7 |
| imidazole glycerol phosphate synthase subunit hish | EZ449_11695 | Not Available | Positive | 2752654 - 2753247 | 21787.2 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | EZ449_11700 | Not Available | Positive | 2753249 - 2753998 | 28016.1 |
| imidazole glycerol phosphate synthase subunit hisf | EZ449_11705 | Not Available | Positive | 2754107 - 2755246 | 42420.3 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | EZ449_11710 | Not Available | Positive | 2755407 - 2756009 | 22751.1 |
| wd40 repeat domain-containing protein | EZ449_11715 | Not Available | Positive | 2756068 - 2756967 | 33896.3 |
| hypothetical protein | EZ449_11720 | Not Available | Negative | 2756987 - 2762803 | 222406.0 |
| hydrolase | EZ449_11725 | Not Available | Negative | 2762839 - 2763624 | 29469.1 |
| universal stress protein | EZ449_11730 | Not Available | Positive | 2763735 - 2764187 | 16464.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

