Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna 2'-phosphotransferase | EZ449_11580 | Not Available | Negative | 2732832 - 2733380 | 20877.9 |
| o-acetyl-adp-ribose deacetylase | EZ449_11585 | Not Available | Negative | 2733423 - 2733932 | 18476.4 |
| nadar family protein | EZ449_11590 | Not Available | Negative | 2733929 - 2734480 | 21333.6 |
| ribose-phosphate pyrophosphokinase | EZ449_11600 | Not Available | Negative | 2734983 - 2735819 | 30531.8 |
| nudix hydrolase | EZ449_11605 | Not Available | Negative | 2735888 - 2736577 | 26307.7 |
| kinase | EZ449_11610 | Not Available | Negative | 2736656 - 2738164 | 57609.3 |
| protein phosphatase 2c domain-containing protein | EZ449_11615 | Not Available | Negative | 2738174 - 2739604 | 54465.3 |
| vwa domain-containing protein | EZ449_11620 | Not Available | Negative | 2739615 - 2740667 | 38963.3 |
| hypothetical protein | EZ449_11625 | Not Available | Negative | 2740669 - 2740923 | 9661.35 |
| hypothetical protein | EZ449_11630 | Not Available | Negative | 2740920 - 2741405 | 18373.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

