Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m28 family peptidase | EZ449_01040 | Not Available | Positive | 254892 - 256031 | 42291.0 |
| hypothetical protein | EZ449_01045 | Not Available | Positive | 256210 - 257286 | 41186.2 |
| hypothetical protein | EZ449_01050 | Not Available | Positive | 257572 - 260346 | 103110.0 |
| class i sam-dependent methyltransferase | EZ449_01055 | Not Available | Negative | 260422 - 261105 | 25749.7 |
| mbl fold metallo-hydrolase | EZ449_01060 | Not Available | Negative | 261207 - 262649 | 53549.2 |
| ytxh domain-containing protein | EZ449_01065 | Not Available | Negative | 262709 - 262957 | 8263.91 |
| sam-dependent methyltransferase | EZ449_01075 | Not Available | Positive | 265454 - 266155 | 26277.8 |
| nicotinate-nucleotide adenylyltransferase | EZ449_01080 | Not Available | Negative | 266725 - 267318 | 23009.7 |
| guanylate kinase | EZ449_01085 | Not Available | Negative | 267453 - 268022 | 21822.9 |
| yicc family protein | EZ449_01090 | Not Available | Negative | 268092 - 268955 | 32700.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

