Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinogalactan endo-1,4-beta-galactosidase | EZ449_11425 | Not Available | Negative | 2698873 - 2699943 | 39318.2 |
| hypothetical protein | EZ449_11430 | Not Available | Negative | 2699950 - 2701044 | 38308.4 |
| ragb/susd family nutrient uptake outer membrane protein | EZ449_11435 | Not Available | Negative | 2701077 - 2702684 | 59307.3 |
| tonb-dependent receptor | EZ449_11440 | Not Available | Negative | 2702713 - 2705694 | 108395.0 |
| hypothetical protein | EZ449_11445 | Not Available | Negative | 2706079 - 2706423 | 12934.5 |
| transcriptional regulator | EZ449_11450 | Not Available | Negative | 2706960 - 2708546 | 58978.1 |
| winged helix family transcriptional regulator | EZ449_11455 | Not Available | Positive | 2708665 - 2709555 | 33600.0 |
| cupin domain-containing protein | EZ449_11460 | Not Available | Negative | 2710001 - 2710408 | 15089.5 |
| carboxymuconolactone decarboxylase family protein | EZ449_11465 | Not Available | Negative | 2710430 - 2711185 | 28002.9 |
| cupin domain-containing protein | EZ449_11475 | Not Available | Negative | 2711909 - 2712394 | 17945.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

