Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter | EZ449_11375 | Not Available | Positive | 2682583 - 2683827 | 45463.4 |
| peptide-methionine (r)-s-oxide reductase | EZ449_11380 | Not Available | Positive | 2683907 - 2684416 | 18940.5 |
| sodium transporter | EZ449_11385 | Not Available | Negative | 2684487 - 2686163 | 60578.4 |
| galactokinase | EZ449_11390 | Not Available | Negative | 2686191 - 2687342 | 42286.8 |
| udp-glucose--hexose-1-phosphate uridylyltransferase | EZ449_11395 | Not Available | Negative | 2687345 - 2688418 | 41342.0 |
| nudix domain-containing protein | EZ449_11400 | Not Available | Positive | 2688577 - 2689275 | 26840.4 |
| phosphate acetyltransferase | EZ449_11405 | Not Available | Positive | 2689952 - 2692039 | 76362.4 |
| acetate kinase | EZ449_11410 | Not Available | Positive | 2692042 - 2693238 | 43223.8 |
| duf4982 domain-containing protein | EZ449_11415 | Not Available | Negative | 2693644 - 2696076 | 90800.9 |
| membrane or secreted protein | EZ449_11420 | Not Available | Negative | 2696088 - 2698655 | 96567.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

