Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inositol monophosphatase | EZ449_11275 | Not Available | Negative | 2649579 - 2650370 | 29834.8 |
| diacylglyceryl transferase | EZ449_11280 | Not Available | Negative | 2650432 - 2651580 | 42742.8 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | EZ449_11285 | Not Available | Negative | 2652049 - 2653371 | 49809.7 |
| ubix family flavin prenyltransferase | EZ449_11290 | Not Available | Negative | 2653546 - 2654115 | 21104.3 |
| response regulator | EZ449_11295 | Not Available | Negative | 2654497 - 2658534 | 153107.0 |
| 1,4-beta-xylanase | EZ449_11300 | Not Available | Negative | 2658587 - 2659663 | 41518.4 |
| glycosyl hydrolase family 43 | EZ449_11305 | Not Available | Negative | 2659711 - 2660730 | 38366.2 |
| glycosyl hydrolase family 43 | EZ449_11310 | Not Available | Negative | 2660759 - 2661793 | 37403.5 |
| ragb/susd family nutrient uptake outer membrane protein | EZ449_11315 | Not Available | Negative | 2661905 - 2663443 | 57081.9 |
| tonb-dependent receptor | EZ449_11320 | Not Available | Negative | 2663457 - 2666624 | 114800.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

