Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_11225 | Not Available | Positive | 2641923 - 2643107 | 44002.6 |
| cold-shock protein | EZ449_11230 | Not Available | Negative | 2643168 - 2643365 | 7296.76 |
| peroxiredoxin | EZ449_11235 | Not Available | Negative | 2643561 - 2644196 | 23435.7 |
| serine protease | EZ449_11240 | Not Available | Negative | 2644355 - 2645458 | 40592.1 |
| sigma-70 family rna polymerase sigma factor | EZ449_11245 | Not Available | Negative | 2645467 - 2646033 | 21871.1 |
| hypothetical protein | EZ449_11250 | Not Available | Positive | 2646242 - 2646460 | 7526.82 |
| hypothetical protein | EZ449_11255 | Not Available | Positive | 2646595 - 2646813 | 7508.8 |
| hypothetical protein | EZ449_11260 | Not Available | Positive | 2647195 - 2647392 | 6711.89 |
| adenylosuccinate lyase | EZ449_11265 | Not Available | Positive | 2647513 - 2648859 | 50509.1 |
| nifu family protein | EZ449_11270 | Not Available | Positive | 2648947 - 2649498 | 20156.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

