Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uridine kinase | EZ449_11175 | Not Available | Positive | 2630655 - 2631299 | 24621.4 |
| hypothetical protein | EZ449_11180 | Not Available | Negative | 2631443 - 2633380 | 72833.1 |
| coa transferase subunit b | EZ449_11185 | Not Available | Negative | 2633527 - 2634189 | 23504.0 |
| coa transferase subunit a | EZ449_11190 | Not Available | Negative | 2634252 - 2634953 | 25378.7 |
| pqq-dependent sugar dehydrogenase | EZ449_11195 | Not Available | Negative | 2635249 - 2636337 | 39859.6 |
| endonuclease muts2 | EZ449_11200 | Not Available | Negative | 2636429 - 2638807 | 89937.0 |
| duf4296 domain-containing protein | EZ449_11205 | Not Available | Negative | 2638809 - 2639378 | 21371.6 |
| yggs family pyridoxal phosphate-dependent enzyme | EZ449_11210 | Not Available | Positive | 2639448 - 2640146 | 26304.7 |
| gnat family n-acetyltransferase | EZ449_11215 | Not Available | Positive | 2640147 - 2640614 | 17801.2 |
| aspartate kinase | EZ449_11220 | Not Available | Positive | 2640616 - 2641890 | 48085.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

