Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylornithine carbamoyltransferase | EZ449_00990 | Not Available | Negative | 242437 - 243408 | 36314.6 |
| aspartate aminotransferase family protein | EZ449_00995 | Not Available | Negative | 243644 - 244774 | 41170.5 |
| n-acetyl-gamma-glutamyl-phosphate reductase | EZ449_01000 | Not Available | Negative | 244853 - 245902 | 38109.3 |
| argininosuccinate synthase | EZ449_01005 | Not Available | Negative | 245919 - 247124 | 44416.0 |
| gnat family n-acetyltransferase | EZ449_01010 | Not Available | Negative | 247219 - 247917 | 26354.3 |
| hypothetical protein | EZ449_01015 | Not Available | Negative | 248284 - 248826 | 18940.5 |
| duf4397 domain-containing protein | EZ449_01020 | Not Available | Positive | 249151 - 249846 | 24702.2 |
| tonb-dependent receptor | EZ449_01025 | Not Available | Positive | 250085 - 252472 | 87993.3 |
| pepsy domain-containing protein | EZ449_01030 | Not Available | Positive | 252482 - 253645 | 44275.2 |
| hypothetical protein | EZ449_01035 | Not Available | Positive | 253664 - 254584 | 35161.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

