Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase i | EZ449_11025 | Not Available | Negative | 2594829 - 2596028 | 45612.7 |
| 4-hydroxy-tetrahydrodipicolinate reductase | EZ449_11030 | Not Available | Negative | 2596158 - 2596892 | 27098.2 |
| hypothetical protein | EZ449_11035 | Not Available | Negative | 2596902 - 2597564 | 24580.6 |
| parb/repb/spo0j family partition protein | EZ449_11040 | Not Available | Negative | 2597621 - 2598529 | 34160.2 |
| para family protein | EZ449_11045 | Not Available | Negative | 2598537 - 2599340 | 29580.9 |
| nadph-dependent oxidoreductase | EZ449_11050 | Not Available | Positive | 2599522 - 2600043 | 19688.9 |
| acyl-coa thioesterase | EZ449_11055 | Not Available | Negative | 2600255 - 2600731 | 17873.0 |
| dead/deah box helicase | EZ449_11060 | Not Available | Negative | 2600998 - 2602929 | 70469.4 |
| hypothetical protein | EZ449_11065 | Not Available | Positive | 2603220 - 2604380 | 42102.6 |
| heat repeat domain-containing protein | EZ449_11070 | Not Available | Positive | 2604392 - 2604859 | 16586.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

