Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase obge | EZ449_10975 | Not Available | Positive | 2583399 - 2584394 | 35745.2 |
| ydcf family protein | EZ449_10980 | Not Available | Negative | 2584445 - 2585200 | 28153.3 |
| ytxh domain-containing protein | EZ449_10985 | Not Available | Negative | 2585314 - 2585679 | 13208.9 |
| osmc family peroxiredoxin | EZ449_10990 | Not Available | Positive | 2586082 - 2586462 | 13845.8 |
| duf2130 domain-containing protein | EZ449_10995 | Not Available | Positive | 2586554 - 2587804 | 48422.1 |
| glycoside hydrolase family 97 protein | EZ449_11000 | Not Available | Positive | 2587943 - 2590078 | 80441.4 |
| nuclear transport factor 2 family protein | EZ449_11005 | Not Available | Positive | 2590546 - 2590866 | 12036.7 |
| alpha/beta hydrolase | EZ449_11010 | Not Available | Positive | 2590872 - 2591822 | 34692.6 |
| bacillithiol biosynthesis cysteine-adding enzyme bshc | EZ449_11015 | Not Available | Positive | 2591985 - 2593571 | 60425.0 |
| ldh family oxidoreductase | EZ449_11020 | Not Available | Positive | 2593642 - 2594727 | 39103.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

