Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid aminotransferase | EZ449_10925 | Not Available | Negative | 2575229 - 2576119 | 33344.0 |
| hypothetical protein | EZ449_10930 | Not Available | Negative | 2576621 - 2577340 | 28251.7 |
| alpha/beta fold hydrolase | EZ449_10935 | Not Available | Positive | 2577450 - 2578145 | 25586.0 |
| addiction module antidote protein, higa family | EZ449_10940 | Not Available | Negative | 2578442 - 2578738 | 11359.6 |
| atp synthase f1 subunit epsilon | EZ449_10945 | Not Available | Negative | 2579046 - 2579291 | 8758.69 |
| f0f1 atp synthase subunit beta | EZ449_10950 | Not Available | Negative | 2579366 - 2580868 | 54193.1 |
| sdr family oxidoreductase | EZ449_10955 | Not Available | Positive | 2581030 - 2581956 | 34124.8 |
| redoxin domain-containing protein | EZ449_10960 | Not Available | Positive | 2582003 - 2582467 | 17050.2 |
| Trna-arg | Not Available | Not Available | Positive | 2582610 - 2582686 | Not Available |
| adenylate kinase | EZ449_10970 | Not Available | Positive | 2582757 - 2583326 | 21057.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

