Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | EZ449_10820 | Not Available | Positive | 2553313 - 2553882 | 21649.3 |
| hypothetical protein | EZ449_10825 | Not Available | Positive | 2553863 - 2554615 | 27967.7 |
| port family protein | EZ449_10830 | Not Available | Positive | 2554700 - 2555512 | 30364.1 |
| abc transporter atp-binding protein | EZ449_10835 | Not Available | Positive | 2555690 - 2556682 | 36905.5 |
| hypothetical protein | EZ449_10840 | Not Available | Negative | 2556692 - 2557102 | 15271.0 |
| duf4230 domain-containing protein | EZ449_10845 | Not Available | Positive | 2557236 - 2557796 | 20995.7 |
| cupin domain-containing protein | EZ449_10850 | Not Available | Negative | 2557968 - 2558318 | 13169.8 |
| threonine dehydratase | EZ449_10855 | Not Available | Negative | 2558509 - 2559759 | 46209.0 |
| 2-isopropylmalate synthase | EZ449_10860 | Not Available | Negative | 2560194 - 2561699 | 54958.4 |
| 3-isopropylmalate dehydrogenase | EZ449_10865 | Not Available | Negative | 2561699 - 2562799 | 40539.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

