Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-1-semialdehyde-2,1-aminomutase | EZ449_10770 | Not Available | Positive | 2544562 - 2545935 | 49882.7 |
| ghkl domain-containing protein | EZ449_10775 | Not Available | Positive | 2546389 - 2547255 | 32762.1 |
| response regulator transcription factor | EZ449_10780 | Not Available | Positive | 2547264 - 2547968 | 27308.2 |
| hypothetical protein | EZ449_10785 | Not Available | Positive | 2547968 - 2548483 | 19699.0 |
| uroporphyrinogen decarboxylase | EZ449_10790 | Not Available | Positive | 2548685 - 2549710 | 38126.2 |
| hypothetical protein | EZ449_10795 | Not Available | Positive | 2549754 - 2549987 | 8700.6 |
| hypothetical protein | EZ449_10800 | Not Available | Positive | 2549990 - 2550406 | 15975.0 |
| hypothetical protein | EZ449_10805 | Not Available | Positive | 2550479 - 2550736 | 10135.2 |
| copd family protein | EZ449_10810 | Not Available | Positive | 2550733 - 2551293 | 21520.3 |
| hypothetical protein | EZ449_10815 | Not Available | Positive | 2551481 - 2552629 | 44113.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

