Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pspc domain-containing protein | EZ449_10720 | Not Available | Positive | 2531549 - 2532250 | 26251.2 |
| hypothetical protein | EZ449_10725 | Not Available | Positive | 2532256 - 2533242 | 36499.0 |
| rdd family protein | EZ449_10730 | Not Available | Positive | 2533326 - 2533937 | 23092.4 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | EZ449_10735 | Not Available | Positive | 2534211 - 2536196 | 73858.8 |
| mechanosensitive ion channel | EZ449_10740 | Not Available | Positive | 2536365 - 2537639 | 48573.4 |
| alpha/beta fold hydrolase | EZ449_10745 | Not Available | Negative | 2537792 - 2538619 | 30816.5 |
| doxx family protein | EZ449_10750 | Not Available | Negative | 2539063 - 2539443 | 14683.9 |
| glutamyl-trna reductase | EZ449_10755 | Not Available | Positive | 2539571 - 2540797 | 46623.5 |
| hydroxymethylbilane synthase | EZ449_10760 | Not Available | Positive | 2541549 - 2543129 | 58691.4 |
| porphobilinogen synthase | EZ449_10765 | Not Available | Positive | 2543497 - 2544465 | 36057.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

