Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidine deaminase | EZ449_10670 | Not Available | Positive | 2519950 - 2520444 | 18158.8 |
| dna gyrase/topoisomerase iv subunit a | EZ449_10675 | Not Available | Positive | 2521165 - 2524068 | 109382.0 |
| nicotinamide riboside transporter pnuc | EZ449_10680 | Not Available | Positive | 2524595 - 2525215 | 24039.1 |
| acyl-coa dehydrogenase | EZ449_10685 | Not Available | Positive | 2525275 - 2526363 | 40440.0 |
| peptide-methionine (s)-s-oxide reductase | EZ449_10690 | Not Available | Negative | 2526364 - 2526906 | 20748.5 |
| hypothetical protein | EZ449_10695 | Not Available | Negative | 2527092 - 2528141 | 38950.7 |
| oxidoreductase | EZ449_10700 | Not Available | Negative | 2528241 - 2529122 | 33209.8 |
| abc transporter atp-binding protein | EZ449_10705 | Not Available | Negative | 2529216 - 2529968 | 27990.8 |
| abc transporter permease | EZ449_10710 | Not Available | Negative | 2529968 - 2530702 | 26217.8 |
| sdr family oxidoreductase | EZ449_10715 | Not Available | Positive | 2530848 - 2531537 | 25363.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

