Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_10605 | Not Available | Positive | 2498448 - 2498864 | 15566.5 |
| dead/deah box helicase | EZ449_10625 | Not Available | Negative | 2503074 - 2504381 | 48112.5 |
| mfs transporter | EZ449_10630 | Not Available | Negative | 2504746 - 2506083 | 49315.3 |
| apc family permease | EZ449_10635 | Not Available | Negative | 2506558 - 2507898 | 48959.2 |
| hypothetical protein | EZ449_10640 | Not Available | Negative | 2507895 - 2508395 | 19640.6 |
| hypothetical protein | EZ449_10645 | Not Available | Negative | 2508398 - 2509084 | 26397.0 |
| type iia dna topoisomerase subunit b | EZ449_10650 | Not Available | Positive | 2509422 - 2511290 | 70726.2 |
| yihy/virulence factor brkb family protein | EZ449_10655 | Not Available | Negative | 2511482 - 2512504 | 37203.4 |
| hypothetical protein | EZ449_10660 | Not Available | Negative | 2512512 - 2514824 | 87236.2 |
| translocation/assembly module tamb | EZ449_10665 | Not Available | Negative | 2514808 - 2519802 | 183257.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

