Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1016 family protein | EZ449_10555 | Not Available | Negative | 2489108 - 2489542 | 16597.8 |
| duf2157 domain-containing protein | EZ449_10560 | Not Available | Negative | 2489632 - 2490666 | 39763.5 |
| sodium:proton antiporter | EZ449_10565 | Not Available | Negative | 2490809 - 2493022 | 81667.1 |
| hypothetical protein | EZ449_10570 | Not Available | Negative | 2493129 - 2493482 | 14048.4 |
| bifunctional riboflavin kinase/fad synthetase | EZ449_10575 | Not Available | Negative | 2493534 - 2494487 | 35858.3 |
| yitt family protein | EZ449_10580 | Not Available | Negative | 2494651 - 2495511 | 30951.8 |
| trna pseudouridine(55) synthase trub | EZ449_10585 | Not Available | Negative | 2495508 - 2496239 | 27466.9 |
| undecaprenyl-diphosphate phosphatase | EZ449_10590 | Not Available | Negative | 2496266 - 2497060 | 29130.8 |
| duf3098 domain-containing protein | EZ449_10595 | Not Available | Negative | 2497140 - 2497370 | 8450.87 |
| ftsx-like permease family protein | EZ449_10600 | Not Available | Negative | 2497370 - 2498248 | 32758.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

