Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_00935 | Not Available | Negative | 233658 - 233864 | 7717.41 |
| hypothetical protein | EZ449_00940 | Not Available | Negative | 233931 - 234782 | 31816.3 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EZ449_00945 | Not Available | Negative | 234856 - 236109 | 45298.3 |
| fic family protein | EZ449_00950 | Not Available | Negative | 236126 - 236887 | 29301.1 |
| hypothetical protein | EZ449_00955 | Not Available | Negative | 236905 - 237237 | 12524.4 |
| hypothetical protein | EZ449_00960 | Not Available | Negative | 237237 - 237425 | 6938.46 |
| argininosuccinate lyase | EZ449_00965 | Not Available | Negative | 237446 - 238777 | 49659.9 |
| m20/m25/m40 family metallo-hydrolase | EZ449_00970 | Not Available | Negative | 238886 - 239950 | 39122.5 |
| pyrroline-5-carboxylate reductase | EZ449_00975 | Not Available | Negative | 240006 - 240818 | 28198.1 |
| acetylglutamate kinase | EZ449_00980 | Not Available | Negative | 241200 - 241988 | 27929.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

