Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stationary phase survival protein sure | EZ449_10455 | Not Available | Positive | 2457782 - 2458054 | 10129.7 |
| lipid-a-disaccharide synthase | EZ449_10460 | Not Available | Positive | 2458136 - 2459245 | 41799.2 |
| susc/raga family tonb-linked outer membrane protein | EZ449_10465 | Not Available | Positive | 2459450 - 2462605 | 113986.0 |
| ragb/susd family nutrient uptake outer membrane protein | EZ449_10470 | Not Available | Positive | 2462617 - 2464272 | 61316.7 |
| laci family transcriptional regulator | EZ449_10475 | Not Available | Positive | 2464468 - 2465472 | 37594.3 |
| duf4965 domain-containing protein | EZ449_10480 | Not Available | Positive | 2465702 - 2468146 | 91126.2 |
| glycoside hydrolase family 92 protein | EZ449_10485 | Not Available | Positive | 2468259 - 2470526 | 85728.0 |
| rok family protein | EZ449_10490 | Not Available | Positive | 2470598 - 2471488 | 32399.0 |
| secretory protein | EZ449_10495 | Not Available | Positive | 2471572 - 2472546 | 36695.5 |
| secretory protein | EZ449_10500 | Not Available | Positive | 2472548 - 2473216 | 25186.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

