Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4295 domain-containing protein | EZ449_10405 | Not Available | Negative | 2444752 - 2444907 | 5524.82 |
| 50s ribosomal protein l33 | EZ449_10410 | Not Available | Negative | 2444989 - 2445171 | 7012.72 |
| 50s ribosomal protein l28 | EZ449_10415 | Not Available | Negative | 2445216 - 2445449 | 8816.89 |
| acetate--coa ligase | EZ449_10420 | Not Available | Positive | 2445664 - 2447559 | 70545.4 |
| ragb/susd family nutrient uptake outer membrane protein | EZ449_10425 | Not Available | Negative | 2447632 - 2448999 | 50530.6 |
| tonb-dependent receptor | EZ449_10430 | Not Available | Negative | 2449014 - 2452025 | 109463.0 |
| csbd family protein | EZ449_10435 | Not Available | Positive | 2452224 - 2452409 | 7014.32 |
| glycosidase | EZ449_10440 | Not Available | Positive | 2452477 - 2453526 | 39208.7 |
| insulinase family protein | EZ449_10445 | Not Available | Negative | 2453770 - 2456703 | 109615.0 |
| 5'/3'-nucleotidase sure | EZ449_10450 | Not Available | Positive | 2456926 - 2457771 | 30670.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

