Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | EZ449_10355 | Not Available | Positive | 2436538 - 2437896 | 50232.7 |
| efflux rnd transporter periplasmic adaptor subunit | EZ449_10360 | Not Available | Positive | 2437927 - 2439270 | 47752.0 |
| glycerol-3-phosphate dehydrogenase | EZ449_10365 | Not Available | Positive | 2439416 - 2440396 | 36387.1 |
| hypothetical protein | EZ449_10370 | Not Available | Positive | 2440752 - 2441096 | 12160.9 |
| 30s ribosomal protein s12 methylthiotransferase rimo | EZ449_10375 | Not Available | Negative | 2441164 - 2442495 | 50231.3 |
| gxxexxy protein | EZ449_10380 | Not Available | Negative | 2442589 - 2442693 | 3771.72 |
| gxxexxy protein | EZ449_10385 | Not Available | Negative | 2442728 - 2442961 | 8851.68 |
| signal recognition particle-docking protein ftsy | EZ449_10390 | Not Available | Negative | 2443031 - 2443993 | 34918.1 |
| pin domain-containing protein | EZ449_10395 | Not Available | Negative | 2443993 - 2444406 | 15720.8 |
| hypothetical protein | EZ449_10400 | Not Available | Negative | 2444406 - 2444633 | 8621.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

