Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparagine synthetase b | EZ449_10305 | Not Available | Negative | 2422130 - 2423311 | 44654.8 |
| peptidylprolyl isomerase | EZ449_10310 | Not Available | Positive | 2423746 - 2424204 | 16500.5 |
| hypothetical protein | EZ449_10315 | Not Available | Positive | 2424278 - 2424820 | 19369.3 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | EZ449_10320 | Not Available | Negative | 2425081 - 2425554 | 18075.0 |
| dna mismatch repair protein muts | EZ449_10325 | Not Available | Positive | 2425720 - 2427534 | 68335.5 |
| t9ss type b sorting domain-containing protein | EZ449_10330 | Not Available | Negative | 2427536 - 2430079 | 92206.5 |
| beta-glucosidase | EZ449_10335 | Not Available | Positive | 2430178 - 2431515 | 50597.5 |
| duf2007 domain-containing protein | EZ449_10340 | Not Available | Positive | 2431651 - 2432082 | 15967.7 |
| aconitate hydratase | EZ449_10345 | Not Available | Negative | 2432260 - 2434539 | 82019.2 |
| polysaccharide deacetylase family protein | EZ449_10350 | Not Available | Negative | 2435808 - 2436464 | 25270.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

