Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | EZ449_10255 | Not Available | Negative | 2410692 - 2411972 | 45113.9 |
| beta-hydroxyacyl-acp dehydratase | EZ449_10260 | Not Available | Negative | 2411965 - 2412411 | 16613.3 |
| type iii polyketide synthase | EZ449_10265 | Not Available | Negative | 2412413 - 2413465 | 39107.5 |
| methyltransferase domain-containing protein | EZ449_10270 | Not Available | Negative | 2413462 - 2414175 | 26966.6 |
| nad(p)/fad-dependent oxidoreductase | EZ449_10275 | Not Available | Negative | 2414176 - 2415309 | 42400.8 |
| sterol desaturase family protein | EZ449_10280 | Not Available | Negative | 2415375 - 2416514 | 44113.9 |
| tetraacyldisaccharide 4'-kinase | EZ449_10285 | Not Available | Positive | 2417199 - 2418260 | 40453.1 |
| purine-nucleoside phosphorylase | EZ449_10290 | Not Available | Positive | 2418232 - 2419047 | 30044.8 |
| hypothetical protein | EZ449_10295 | Not Available | Positive | 2419085 - 2421055 | 75483.4 |
| port family protein | EZ449_10300 | Not Available | Negative | 2421124 - 2421855 | 24962.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

