Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase | EZ449_10155 | Not Available | Positive | 2393560 - 2394636 | 40834.3 |
| response regulator transcription factor | EZ449_10160 | Not Available | Positive | 2394677 - 2395327 | 23970.2 |
| sigma-70 family rna polymerase sigma factor | EZ449_10165 | Not Available | Positive | 2395441 - 2395959 | 19916.0 |
| hypothetical protein | EZ449_10170 | Not Available | Negative | 2396177 - 2396680 | 19531.8 |
| sigma-70 family rna polymerase sigma factor | EZ449_10175 | Not Available | Negative | 2396670 - 2397119 | 17354.8 |
| exodeoxyribonuclease iii | EZ449_10180 | Not Available | Positive | 2397285 - 2398058 | 29577.2 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | EZ449_10185 | Not Available | Negative | 2398081 - 2398770 | 26670.6 |
| hypothetical protein | EZ449_10190 | Not Available | Negative | 2398969 - 2399259 | 11216.7 |
| m42 family peptidase | EZ449_10195 | Not Available | Negative | 2399259 - 2400374 | 41717.0 |
| gnat family n-acetyltransferase | EZ449_10200 | Not Available | Negative | 2400462 - 2400869 | 15907.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

