Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l17 | EZ449_10105 | Not Available | Positive | 2382262 - 2382786 | 19422.4 |
| aminoglycoside phosphotransferase family protein | EZ449_10110 | Not Available | Negative | 2382991 - 2384067 | 41333.0 |
| nucleotidyltransferase | EZ449_10115 | Not Available | Negative | 2384058 - 2384957 | 33928.2 |
| duf853 family protein | EZ449_10120 | Not Available | Negative | 2385028 - 2386602 | 57048.8 |
| merr family transcriptional regulator | EZ449_10125 | Not Available | Negative | 2386707 - 2387003 | 11519.8 |
| j domain-containing protein | EZ449_10130 | Not Available | Negative | 2387010 - 2387906 | 33519.3 |
| s9 family peptidase | EZ449_10135 | Not Available | Negative | 2388098 - 2390515 | 89457.5 |
| duf1801 domain-containing protein | EZ449_10140 | Not Available | Negative | 2390757 - 2391173 | 15856.0 |
| xre family transcriptional regulator | EZ449_10145 | Not Available | Positive | 2391525 - 2391947 | 16522.7 |
| gfo/idh/moca family oxidoreductase | EZ449_10150 | Not Available | Positive | 2392097 - 2393206 | 40919.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

