Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter frigidisoli strain RP-3-11
Accession NumberSJSN00000000.1
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-pseudo | Not Available | Not Available | + | 320 - 400 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 382 - 493 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 404 - 515 | Not Available |
| Trna-val | Not Available | Not Available | + | 438 - 515 | Not Available |
| Trna-val | Not Available | Not Available | + | 562 - 636 | Not Available |
| dna repair protein reco | EZ449_00015 | Not Available | - | 785 - 1510 | 28034.1 |
| fis family transcriptional regulator | EZ449_00020 | Not Available | + | 1834 - 3984 | 79573.0 |
| isoleucyl-trna synthetase | EZ449_00025 | Not Available | - | 4287 - 4559 | 10200.7 |
| isoleucine--trna ligase | EZ449_00030 | Not Available | + | 4828 - 8283 | 131682.0 |
| Ncrna_class:srp_rna | Not Available | Not Available | + | 4964 - 5063 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.