Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_09850 | Not Available | Positive | 2344360 - 2344818 | 16574.9 |
| hypothetical protein | EZ449_09855 | Not Available | Positive | 2344974 - 2345345 | 13847.8 |
| hypothetical protein | EZ449_09860 | Not Available | Positive | 2345486 - 2348299 | 104178.0 |
| hypothetical protein | EZ449_09865 | Not Available | Negative | 2348564 - 2349391 | 32010.2 |
| prohibitin family protein | EZ449_09875 | Not Available | Negative | 2350188 - 2351093 | 32972.1 |
| 30s ribosomal protein s12 | EZ449_09880 | Not Available | Positive | 2351564 - 2351977 | 15123.6 |
| 30s ribosomal protein s7 | EZ449_09885 | Not Available | Positive | 2351995 - 2352462 | 17552.5 |
| elongation factor g | EZ449_09890 | Not Available | Positive | 2352594 - 2354708 | 77624.0 |
| 30s ribosomal protein s10 | EZ449_09895 | Not Available | Positive | 2354775 - 2355080 | 11418.2 |
| hypothetical protein | EZ449_09900 | Not Available | Positive | 2355451 - 2355693 | 8978.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

