Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide epimerase | EZ449_09800 | Not Available | Positive | 2336324 - 2337421 | 40666.0 |
| glycoside hydrolase family 25 protein | EZ449_09805 | Not Available | Negative | 2337566 - 2338429 | 33798.1 |
| nuclear transport factor 2 family protein | EZ449_09810 | Not Available | Positive | 2338674 - 2339021 | 12774.2 |
| mfs transporter | EZ449_09815 | Not Available | Positive | 2339145 - 2340371 | 45193.8 |
| arabinan endo-1,5-alpha-l-arabinosidase | EZ449_09820 | Not Available | Negative | 2340412 - 2341392 | 36794.6 |
| hypothetical protein | EZ449_09825 | Not Available | Negative | 2341838 - 2342047 | 7975.76 |
| hypothetical protein | EZ449_09830 | Not Available | Positive | 2342062 - 2342271 | 7975.76 |
| duf2132 domain-containing protein | EZ449_09835 | Not Available | Positive | 2342877 - 2343098 | 8629.49 |
| hypothetical protein | EZ449_09840 | Not Available | Negative | 2343129 - 2343698 | 21988.6 |
| hypothetical protein | EZ449_09845 | Not Available | Positive | 2343851 - 2344234 | 14356.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

