Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_09750 | Not Available | Negative | 2325082 - 2325636 | 21442.1 |
| hypothetical protein | EZ449_09755 | Not Available | Positive | 2325710 - 2326009 | 11301.6 |
| atp-binding cassette domain-containing protein | EZ449_09760 | Not Available | Positive | 2326234 - 2327856 | 60943.3 |
| hypothetical protein | EZ449_09765 | Not Available | Positive | 2327926 - 2328582 | 25147.9 |
| duf4397 domain-containing protein | EZ449_09770 | Not Available | Positive | 2328682 - 2329380 | 25091.3 |
| rna polymerase sigma factor | EZ449_09775 | Not Available | Positive | 2329498 - 2330082 | 22396.8 |
| hypothetical protein | EZ449_09780 | Not Available | Positive | 2330075 - 2331292 | 44968.1 |
| peptidylprolyl isomerase | EZ449_09785 | Not Available | Negative | 2332695 - 2333201 | 17944.8 |
| thioredoxin domain-containing protein | EZ449_09790 | Not Available | Negative | 2333212 - 2335233 | 77307.4 |
| duf1016 domain-containing protein | EZ449_09795 | Not Available | Positive | 2335338 - 2336321 | 38721.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

