Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_09650 | Not Available | Positive | 2310258 - 2310566 | 11214.4 |
| hypothetical protein | EZ449_09655 | Not Available | Positive | 2310621 - 2311319 | 26421.5 |
| adp-forming succinate--coa ligase subunit beta | EZ449_09660 | Not Available | Positive | 2311529 - 2312728 | 43158.1 |
| transcriptional regulator | EZ449_09665 | Not Available | Negative | 2313221 - 2313427 | 7547.55 |
| duf2975 domain-containing protein | EZ449_09670 | Not Available | Negative | 2313442 - 2313933 | 18615.1 |
| duf2975 domain-containing protein | EZ449_09675 | Not Available | Negative | 2313935 - 2314744 | 30454.9 |
| hypothetical protein | EZ449_09680 | Not Available | Negative | 2314747 - 2315340 | 22239.5 |
| hypothetical protein | EZ449_09685 | Not Available | Negative | 2315343 - 2315930 | 22076.4 |
| rna polymerase sigma factor rpod/siga | EZ449_09690 | Not Available | Positive | 2316373 - 2317233 | 32634.0 |
| atp-binding cassette domain-containing protein | EZ449_09695 | Not Available | Positive | 2317645 - 2317806 | 6024.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

