Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal-phosphate dependent enzyme | EZ449_09600 | Not Available | Negative | 2300850 - 2302211 | 49619.4 |
| dna-protecting protein dpra | EZ449_09605 | Not Available | Negative | 2302499 - 2303593 | 39881.3 |
| hypothetical protein | EZ449_09610 | Not Available | Negative | 2303651 - 2303917 | 10176.4 |
| hypothetical protein | EZ449_09615 | Not Available | Negative | 2304059 - 2305546 | 53917.6 |
| haloacid dehalogenase | EZ449_09620 | Not Available | Negative | 2305549 - 2306157 | 23907.6 |
| hypothetical protein | EZ449_09625 | Not Available | Negative | 2306159 - 2306635 | 17410.0 |
| abc transporter atp-binding protein | EZ449_09630 | Not Available | Negative | 2306807 - 2307457 | 23557.5 |
| hypothetical protein | EZ449_09635 | Not Available | Positive | 2307645 - 2308280 | 23762.4 |
| transcriptional regulator | EZ449_09640 | Not Available | Positive | 2308282 - 2308578 | 11008.5 |
| duf4173 domain-containing protein | EZ449_09645 | Not Available | Positive | 2308633 - 2310216 | 60900.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

