Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose 5-phosphate isomerase b | EZ449_00830 | Not Available | Positive | 209834 - 210271 | 15996.9 |
| m28 family peptidase | EZ449_00835 | Not Available | Positive | 210302 - 211936 | 60510.3 |
| duf2281 domain-containing protein | EZ449_00840 | Not Available | Positive | 212052 - 212261 | 8141.94 |
| type ii toxin-antitoxin system vapc family toxin | EZ449_00845 | Not Available | Positive | 212261 - 212647 | 14906.0 |
| iron-sulfur cluster-binding protein | EZ449_00850 | Not Available | Positive | 212741 - 214129 | 52489.2 |
| duf4160 domain-containing protein | EZ449_00855 | Not Available | Positive | 214193 - 214426 | 9041.87 |
| duf2442 domain-containing protein | EZ449_00860 | Not Available | Positive | 214416 - 214658 | 9467.17 |
| dehydrogenase | EZ449_00865 | Not Available | Positive | 214679 - 216655 | 73519.2 |
| adenine deaminase | EZ449_00870 | Not Available | Positive | 216750 - 218387 | 59953.3 |
| duf433 domain-containing protein | EZ449_00880 | Not Available | Negative | 218722 - 218958 | 8930.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

