Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EZ449_09450 | Not Available | Negative | 2260324 - 2262903 | 93085.5 |
| hypothetical protein | EZ449_09455 | Not Available | Positive | 2263211 - 2263651 | 15967.6 |
| imp dehydrogenase | EZ449_09460 | Not Available | Negative | 2263879 - 2265348 | 52395.7 |
| pyrimidine/purine nucleoside phosphorylase | EZ449_09465 | Not Available | Positive | 2265526 - 2265807 | 10439.4 |
| insulinase family protein | EZ449_09470 | Not Available | Negative | 2265864 - 2267135 | 47799.9 |
| insulinase family protein | EZ449_09475 | Not Available | Negative | 2267125 - 2268372 | 46990.6 |
| dehypoxanthine futalosine cyclase | EZ449_09480 | Not Available | Positive | 2268548 - 2269672 | 42109.6 |
| fmn-binding glutamate synthase family protein | EZ449_09485 | Not Available | Negative | 2270173 - 2271834 | 60664.8 |
| txe/yoeb family addiction module toxin | EZ449_09490 | Not Available | Negative | 2271846 - 2272100 | 10116.3 |
| type ii toxin-antitoxin system prevent-host-death family antitoxin | EZ449_09495 | Not Available | Negative | 2272093 - 2272350 | 9785.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

