Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf922 domain-containing protein | EZ449_09395 | Not Available | Positive | 2249190 - 2249756 | 22385.7 |
| diacylglycerol kinase family protein | EZ449_09400 | Not Available | Negative | 2249739 - 2250119 | 13943.5 |
| beta-n-acetylhexosaminidase | EZ449_09410 | Not Available | Negative | 2250848 - 2252758 | 70592.9 |
| thioredoxin-disulfide reductase | EZ449_09415 | Not Available | Negative | 2253137 - 2254093 | 34327.9 |
| membrane dipeptidase | EZ449_09420 | Not Available | Negative | 2254252 - 2255415 | 42591.3 |
| duf3060 domain-containing protein | EZ449_09425 | Not Available | Negative | 2255479 - 2255859 | 13150.1 |
| acyl-coa carboxylase subunit beta | EZ449_09430 | Not Available | Negative | 2255912 - 2257540 | 59198.4 |
| duf2721 domain-containing protein | EZ449_09435 | Not Available | Positive | 2258190 - 2258633 | 16893.3 |
| maoc family dehydratase | EZ449_09440 | Not Available | Negative | 2258642 - 2259112 | 17904.6 |
| tigr00730 family rossman fold protein | EZ449_09445 | Not Available | Negative | 2259175 - 2259768 | 22059.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

