Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EZ449_09345 | Not Available | Positive | 2239194 - 2240897 | 63758.5 |
| ribonuclease r | EZ449_09350 | Not Available | Positive | 2241127 - 2243259 | 80605.2 |
| polyprenyl synthetase family protein | EZ449_09355 | Not Available | Positive | 2243303 - 2244277 | 36457.9 |
| 50s ribosomal protein l27 | EZ449_09360 | Not Available | Negative | 2244483 - 2244905 | 14873.9 |
| 50s ribosomal protein l21 | EZ449_09365 | Not Available | Negative | 2244957 - 2245268 | 11371.9 |
| hypothetical protein | EZ449_09370 | Not Available | Positive | 2245597 - 2245878 | 10305.2 |
| hypothetical protein | EZ449_09375 | Not Available | Negative | 2245889 - 2246389 | 19234.5 |
| cation:dicarboxylase symporter family transporter | EZ449_09380 | Not Available | Negative | 2246534 - 2247910 | 49692.4 |
| rna polymerase sigma factor | EZ449_09385 | Not Available | Positive | 2248070 - 2248567 | 19453.2 |
| hypothetical protein | EZ449_09390 | Not Available | Positive | 2248554 - 2249153 | 23328.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

