Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfite exporter taue/safe family protein | EZ449_09295 | Not Available | Negative | 2227689 - 2228450 | 27183.4 |
| arginine--trna ligase | EZ449_09300 | Not Available | Negative | 2228551 - 2230323 | 66496.2 |
| amidinotransferase | EZ449_09305 | Not Available | Positive | 2230553 - 2231998 | 54727.5 |
| amidinotransferase | EZ449_09310 | Not Available | Positive | 2232082 - 2232993 | 34434.1 |
| phna protein | EZ449_09315 | Not Available | Positive | 2233714 - 2234292 | 21621.7 |
| hypothetical protein | EZ449_09320 | Not Available | Negative | 2234385 - 2234615 | 8546.32 |
| arginine decarboxylase | EZ449_09325 | Not Available | Positive | 2235062 - 2236450 | 54007.5 |
| duf72 domain-containing protein | EZ449_09330 | Not Available | Positive | 2236944 - 2237840 | 34130.8 |
| duf1579 domain-containing protein | EZ449_09335 | Not Available | Negative | 2237903 - 2238403 | 18868.3 |
| 3'-5' exonuclease | EZ449_09340 | Not Available | Positive | 2238481 - 2239194 | 27546.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

