Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m1 family peptidase | EZ449_09245 | Not Available | Negative | 2214615 - 2216291 | 63837.9 |
| aminopeptidase p family protein | EZ449_09250 | Not Available | Negative | 2216301 - 2217695 | 52167.5 |
| glycoside hydrolase family 127 protein | EZ449_09255 | Not Available | Positive | 2217943 - 2220309 | 89643.5 |
| hypothetical protein | EZ449_09260 | Not Available | Negative | 2220605 - 2223358 | 103130.0 |
| hypothetical protein | EZ449_09265 | Not Available | Positive | 2223940 - 2224173 | 8857.81 |
| hypothetical protein | EZ449_09270 | Not Available | Positive | 2224173 - 2224367 | 7709.28 |
| pa2169 family four-helix-bundle protein | EZ449_09275 | Not Available | Negative | 2224441 - 2224893 | 16394.2 |
| ai-2e family transporter | EZ449_09280 | Not Available | Positive | 2225613 - 2226737 | 41812.5 |
| protease | EZ449_09285 | Not Available | Positive | 2226791 - 2227312 | 18637.3 |
| ytxh domain-containing protein | EZ449_09290 | Not Available | Positive | 2227384 - 2227584 | 7447.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

