Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_09185 | Not Available | Negative | 2201093 - 2201515 | 16035.6 |
| hypothetical protein | EZ449_09190 | Not Available | Negative | 2201862 - 2202884 | 38457.6 |
| hypothetical protein | EZ449_09195 | Not Available | Negative | 2203287 - 2204021 | 27554.4 |
| hypothetical protein | EZ449_09200 | Not Available | Negative | 2204161 - 2204823 | 24577.9 |
| arac family transcriptional regulator | EZ449_09210 | Not Available | Positive | 2206979 - 2207854 | 33475.0 |
| arac family transcriptional regulator | EZ449_09220 | Not Available | Negative | 2208257 - 2209159 | 33649.4 |
| fad-dependent oxidoreductase | EZ449_09225 | Not Available | Negative | 2209533 - 2210777 | 45323.3 |
| 4-hydroxyproline epimerase | EZ449_09230 | Not Available | Negative | 2210852 - 2211853 | 36718.9 |
| aldehyde dehydrogenase (nadp(+)) | EZ449_09235 | Not Available | Negative | 2211846 - 2213432 | 56794.4 |
| dihydrodipicolinate synthase family protein | EZ449_09240 | Not Available | Negative | 2213447 - 2214364 | 33634.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

